Least resolved trees for two-colored best match graphs

نویسندگان

چکیده

2-colored best match graphs (2-BMGs) form a subclass of sink-free bi-transitive that appears in phylogenetic combinatorics. There, 2-BMGs describe evolutionarily most closely related genes between pair species. They are explained by unique least resolved tree (LRT). Introducing the concept support vertices we derive an $O(|V|+|E|\log^2|V|)$-time algorithm to recognize and construct its LRT. The approach can be extended also binary-explainable with same complexity. An empirical comparison emphasizes efficiency new algorithm.

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ژورنال

عنوان ژورنال: Journal of Graph Algorithms and Applications

سال: 2021

ISSN: ['1526-1719']

DOI: https://doi.org/10.7155/jgaa.00564